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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
101
target gene predictions
79
accessible chromatin
66
chromatin state
52
gene expression
33
differential activity
19
eQTL
16
binding sites
12
histone modifications
12
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
172
September, 2022
93
February, 2021
47
March, 2023
40
May, 2021
28
February, 2024
24
November, 2021
20
January, 2021
14
June, 2020
14
March, 2020
8
August, 2021
8
May, 2020
7
August, 2017
7
August, 2018
7
January, 2020
7
January, 2022
6
October, 2019
3
February, 2020
3
March, 2024
3
October, 2022
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
342
bed bed3+
84
tsv
61
bigWig
58
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
517
Homo sapiens
Biosample type
285
tissue
156
primary cell
73
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
471
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
418
hg19
122
GRCh38
organ_slims!
ovary
BIOSAMPLE
TYPE
517 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
13
2
1
1
2
2
2
spinal cord
14
8
1
7
1
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 21 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 15 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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