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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
47
target gene predictions
41
chromatin state
12
binding sites
9
accessible chromatin
9
histone modifications
2
eQTL
2
gene expression
Date released
113
September, 2022
65
February, 2021
9
June, 2020
6
May, 2021
3
August, 2017
3
February, 2024
3
October, 2022
2
January, 2022
2
March, 2024
1
March, 2020
Available data
165
bed bed3+
38
bed bed9
2
tsv
Organism
207
Homo sapiens
Biosample type
136
tissue
46
cell line
22
primary cell
3
in vitro differentiated cells
Organ
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
207
AMP
Genome assembly (visualization)
203
hg19
42
GRCh38
organ_slims!
adipose tissue
epithelium
gonad
BIOSAMPLE
TYPE
207 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
EH
2
1
1
EL
2
1
1
+ See 6 more…
primary cell
foreskin fibroblast
6
2
1
4
1
2
foreskin melanocyte
4
1
1
in vitro differentiated cells
foreskin melanocyte
1
1
1
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