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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
145
candidate regulatory elements
90
target gene predictions
82
chromatin state
46
accessible chromatin
37
gene expression
30
binding sites
18
differential activity
16
histone modifications
13
variant allelic effects
7
eQTL
6
Fine-mapped variants
3
caQTL
Date released
215
September, 2022
112
February, 2021
35
September, 2023
20
February, 2024
14
January, 2020
14
June, 2020
13
November, 2021
12
May, 2020
10
March, 2020
9
May, 2021
6
October, 2022
5
January, 2022
4
August, 2017
4
February, 2020
4
February, 2023
4
March, 2023
3
April, 2020
3
March, 2024
2
November, 2019
2
October, 2019
1
August, 2021
1
May, 2019
Available data
345
bed bed3+
78
bed bed9
61
tsv
33
bigWig
7
bigBed bed9
2
txt
Organism
493
Homo sapiens
Biosample type
259
tissue
184
primary cell
48
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
442
AMP
35
KPMP
13
ENCODE
3
LungMap
Genome assembly (visualization)
428
hg19
138
GRCh38
organ_slims!
limb
penis
BIOSAMPLE
TYPE
493 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
tissue
placenta
26
15
14
1
1
2
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
3
1
2
2
3
1
transverse colon
8
5
4
1
1
+ See 16 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
fibroblast of villous mesenchyme
2
1
1
1
2
1
+ See 30 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 8 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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