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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 69candidate regulatory elements
  • 36chromatin state
  • 36target gene predictions
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2eQTL
  • 2gene expression
Date released
  • 98September, 2022
  • 46February, 2021
  • 7June, 2020
  • 3August, 2017
  • 3February, 2024
  • 3November, 2021
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 131bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 166Homo sapiens
Collection Tags
  • 99EpiMap
  • 37ENCODE
  • 17ChIP-Atlas
  • 3AMP
  • 3T2DKP
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
  • 1DGA
Biosample type
  • 131tissue
  • 32cell line
  • 3primary cell
Organ
  • 2909vasculature
  • 2855bodily fluid
  • 2845blood vessel
  • 2844blood
  • 2657vein
  • 899epithelium
  • 652kidney
  • 456brain
  • 449connective tissue
  • 371musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 159liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 96adipose tissue
  • 89bone element
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 77artery
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 163AMP
  • 3ENCODE
Genome assembly (visualization)
  • 162hg19
  • 40GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

166 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine27131311
sigmoid colon10561
transverse colon84411
colonic mucosa4321
mucosa of rectum432
cell line
HT-29211111
SW480211111
HCT116213
RKO1111
HCT-116 cell12
primary cell
colon epithelial cell3
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