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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
36
chromatin state
36
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
131
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
166
Homo sapiens
Collection Tags
99
EpiMap
37
ENCODE
17
ChIP-Atlas
3
AMP
3
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
1
DGA
Biosample type
131
tissue
32
cell line
3
primary cell
Organ
2909
vasculature
2855
bodily fluid
2845
blood vessel
2844
blood
2657
vein
899
epithelium
652
kidney
456
brain
449
connective tissue
371
musculature of body
304
lung
275
intestine
263
pancreas
250
heart
241
limb
210
embryo
194
skin of body
166
large intestine
159
liver
143
extraembryonic component
113
stomach
109
eye
96
adipose tissue
89
bone element
82
mammary gland
81
small intestine
80
uterus
77
artery
76
prostate gland
72
placenta
67
adrenal gland
64
ureter
63
penis
61
lymph node
48
gonad
48
thymus
43
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
23
lymphatic vessel
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
163
AMP
3
ENCODE
Genome assembly (visualization)
162
hg19
40
GRCh38
software_used.software.name!
abc
BIOSAMPLE
TYPE
166 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
5
6
1
transverse colon
8
4
4
1
1
colonic mucosa
4
3
2
1
mucosa of rectum
4
3
2
+ See 7 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
1
3
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
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