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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 44target gene predictions
  • 36chromatin state
  • 33candidate regulatory elements
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2eQTL
  • 2gene expression
Date released
  • 98September, 2022
  • 10February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 103bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 138Homo sapiens
Collection Tags
  • 99EpiMap
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
  • 1ENCODE
Biosample type
  • 104tissue
  • 28cell line
  • 6primary cell
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • 2828blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • 440connective tissue
  • 416brain
  • 302musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 132AMP
  • 6ENCODE
Genome assembly (visualization)
  • 134hg19
  • 43GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

138 results

search-icontable-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine14131311
sigmoid colon7551
transverse colon54411
colonic mucosa2321
mucosa of rectum232
cell line
HT-29211111
SW480111111
HCT116311
HCT-116 cell112
RKO111
primary cell
colon epithelial cell33
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