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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
target gene predictions
36
chromatin state
33
candidate regulatory elements
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
103
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
138
Homo sapiens
Collection Tags
99
EpiMap
17
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
1
ENCODE
Biosample type
104
tissue
28
cell line
6
primary cell
Organ
2876
vasculature
2831
bodily fluid
2828
blood vessel
2822
blood
2654
vein
900
epithelium
585
kidney
473
connective tissue
434
brain
361
heart
308
musculature of body
290
pancreas
250
lung
231
intestine
196
limb
188
liver
185
embryo
163
skin of body
138
large intestine
127
adipose tissue
120
extraembryonic component
100
eye
91
stomach
79
artery
78
bone element
78
uterus
73
mammary gland
66
small intestine
64
prostate gland
60
__MARKER__
60
placenta
59
adrenal gland
49
lymph node
46
penis
46
ureter
41
gonad
40
thymus
35
esophagus
35
spinal cord
25
spleen
22
nerve
21
testis
20
lymphoid tissue
19
lymphatic vessel
19
ovary
19
thyroid gland
17
skeleton
15
mouth
14
bronchus
13
pituitary gland
12
bone marrow
10
breast
9
urinary bladder
8
tongue
8
vagina
5
trachea
4
nose
1
pericardium
Project
132
AMP
6
ENCODE
Genome assembly (visualization)
134
hg19
43
GRCh38
software_used.software.name!
encode-ccres
BIOSAMPLE
TYPE
138 results
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Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
13
1
1
sigmoid colon
7
5
5
1
transverse colon
5
4
4
1
1
colonic mucosa
2
3
2
1
mucosa of rectum
2
3
2
+ See 6 more…
cell line
HT-29
2
1
1
1
1
1
SW480
1
1
1
1
1
1
HCT116
3
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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