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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 69candidate regulatory elements
  • 43target gene predictions
  • 36chromatin state
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2eQTL
  • 2gene expression
Date released
  • 98September, 2022
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1October, 2022
Available data
  • 138bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 173Homo sapiens
Collection Tags
  • 99EpiMap
  • 37ENCODE
  • 17ChIP-Atlas
  • 6AMP
  • 6T2DKP
  • 5DGA
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 133tissue
  • 34cell line
  • 6primary cell
Organ
  • 2912vasculature
  • 2859bodily fluid
  • 2848blood
  • 2847blood vessel
  • 2658vein
  • 958epithelium
  • 652kidney
  • 478connective tissue
  • 465brain
  • 379musculature of body
  • 310lung
  • 287intestine
  • 276pancreas
  • 254heart
  • 244limb
  • 214embryo
  • 204skin of body
  • 173large intestine
  • 162liver
  • 146extraembryonic component
  • 118stomach
  • 109eye
  • 98adipose tissue
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73placenta
  • 72adrenal gland
  • 64penis
  • 64ureter
  • 62lymph node
  • 49gonad
  • 48thymus
  • 44esophagus
  • 43spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23thyroid gland
  • 22ovary
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10vagina
  • 9urinary bladder
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 167AMP
  • 6ENCODE
Genome assembly (visualization)
  • 169hg19
  • 43GRCh38
software_used.software.name!
  • nospecificsoft_customcode
BIOSAMPLE
TYPE

173 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine27141311
sigmoid colon10651
transverse colon85411
colonic mucosa4231
mucosa of rectum423
cell line
HT-29221111
SW480211111
HCT116231
HCT-116 cell112
RKO1111
primary cell
colon epithelial cell33
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