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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
43
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
October, 2022
Available data
138
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
173
Homo sapiens
Collection Tags
99
EpiMap
37
ENCODE
17
ChIP-Atlas
6
AMP
6
T2DKP
5
DGA
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
Biosample type
133
tissue
34
cell line
6
primary cell
Organ
2912
vasculature
2859
bodily fluid
2848
blood
2847
blood vessel
2658
vein
958
epithelium
652
kidney
478
connective tissue
465
brain
379
musculature of body
310
lung
287
intestine
276
pancreas
254
heart
244
limb
214
embryo
204
skin of body
173
large intestine
162
liver
146
extraembryonic component
118
stomach
109
eye
98
adipose tissue
89
bone element
87
mammary gland
83
small intestine
83
uterus
79
artery
78
prostate gland
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
43
spinal cord
33
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
thyroid gland
22
ovary
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
167
AMP
6
ENCODE
Genome assembly (visualization)
169
hg19
43
GRCh38
software_used.software.name!
nospecificsoft_customcode
BIOSAMPLE
TYPE
173 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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