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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 69candidate regulatory elements
  • 44target gene predictions
  • 36chromatin state
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2gene expression
Date released
  • 98September, 2022
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 137bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 172Homo sapiens
Collection Tags
  • 99EpiMap
  • 37ENCODE
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2GTEx
Biosample type
  • 132tissue
  • 34cell line
  • 6primary cell
Organ
  • 2904vasculature
  • 2853bodily fluid
  • 2842blood
  • 2839blood vessel
  • 2658vein
  • 957epithelium
  • 651kidney
  • 463connective tissue
  • 450brain
  • 373musculature of body
  • 310lung
  • 286intestine
  • 267pancreas
  • 254heart
  • 242limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 159liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 90adipose tissue
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82uterus
  • 77prostate gland
  • 73artery
  • 72adrenal gland
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 42spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24nerve
  • 24testis
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 166AMP
  • 6ENCODE
Genome assembly (visualization)
  • 170hg19
  • 41GRCh38
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

172 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine27141311
sigmoid colon10751
transverse colon8541
colonic mucosa4231
mucosa of rectum423
cell line
HT-29221111
SW480211111
HCT116231
HCT-116 cell112
RKO1111
primary cell
colon epithelial cell33
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