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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
target gene predictions
36
candidate regulatory elements
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
52
July, 2026
46
February, 2021
33
September, 2022
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
1
March, 2020
1
October, 2022
Available data
125
bed bed3+
33
bed bed9
3
bigWig
Organism
158
Homo sapiens
Collection Tags
52
ENCODE-rE2G
37
ENCODE
33
EpiMap
17
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
T1D
2
T2D
2
eQTLCatalogue
Biosample type
102
tissue
50
cell line
6
primary cell
Organ
3318
blood
2819
vasculature
2801
bodily fluid
2799
blood vessel
2654
vein
764
brain
585
epithelium
404
kidney
395
heart
383
connective tissue
299
lung
245
intestine
239
musculature of body
226
skin of body
213
pancreas
193
liver
158
large intestine
151
embryo
147
limb
142
eye
113
adipose tissue
111
muscle organ
108
extraembryonic component
92
stomach
83
uterus
76
mammary gland
74
bone element
73
adrenal gland
71
thymus
68
artery
65
placenta
60
__MARKER__
60
prostate gland
59
small intestine
50
spleen
47
ureter
46
gonad
46
lymph node
44
penis
38
thyroid gland
32
esophagus
32
spinal cord
23
ovary
22
testis
18
skeleton
17
nerve
14
lymphatic vessel
13
lymphoid tissue
12
bronchus
12
mouth
12
pituitary gland
11
bone marrow
10
breast
8
urinary bladder
7
tongue
7
vagina
5
trachea
2
nose
1
embryonic structure
1
gallbladder
Project
152
AMP
6
ENCODE
Genome assembly (visualization)
104
hg19
95
GRCh38
software_used.software.name!
r
BIOSAMPLE
TYPE
158 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
15
14
13
1
1
sigmoid colon
5
5
5
1
transverse colon
5
4
4
1
1
colonic mucosa
2
2
3
1
mucosa of rectum
2
3
+ See 7 more…
cell line
HCT116
18
1
1
HT-29
2
1
1
1
1
1
SW480
1
1
1
1
1
1
RKO
1
1
1
1
1
Caco-2
3
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
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