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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 63target gene predictions
  • 36candidate regulatory elements
  • 36chromatin state
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2eQTL
Date released
  • 52July, 2026
  • 46February, 2021
  • 33September, 2022
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 2February, 2024
  • 2January, 2022
  • 1March, 2020
  • 1October, 2022
Available data
  • 125bed bed3+
  • 33bed bed9
  • 3bigWig
Organism
  • 158Homo sapiens
Collection Tags
  • 52ENCODE-rE2G
  • 37ENCODE
  • 33EpiMap
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 102tissue
  • 50cell line
  • 6primary cell
Organ
  • 3318blood
  • 2819vasculature
  • 2801bodily fluid
  • 2799blood vessel
  • 2654vein
  • 764brain
  • 585epithelium
  • 404kidney
  • 395heart
  • 383connective tissue
  • 299lung
  • 245intestine
  • 239musculature of body
  • 226skin of body
  • 213pancreas
  • 193liver
  • 158large intestine
  • 151embryo
  • 147limb
  • 142eye
  • 113adipose tissue
  • 111muscle organ
  • 108extraembryonic component
  • 92stomach
  • 83uterus
  • 76mammary gland
  • 74bone element
  • 73adrenal gland
  • 71thymus
  • 68artery
  • 65placenta
  • 60__MARKER__
  • 60prostate gland
  • 59small intestine
  • 50spleen
  • 47ureter
  • 46gonad
  • 46lymph node
  • 44penis
  • 38thyroid gland
  • 32esophagus
  • 32spinal cord
  • 23ovary
  • 22testis
  • 18skeleton
  • 17nerve
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 12bronchus
  • 12mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 152AMP
  • 6ENCODE
Genome assembly (visualization)
  • 104hg19
  • 95GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

158 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine15141311
sigmoid colon5551
transverse colon54411
colonic mucosa2231
mucosa of rectum23
cell line
HCT1161811
HT-29211111
SW480111111
RKO11111
Caco-231
primary cell
colon epithelial cell33
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