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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 66ChIP-seq
  • 36DNase-seq
  • 8ATAC-seq
  • 4Hi-C
  • 4total RNA-seq
  • 1WGBS
Assay category
  • 66DNA binding
  • 44DNA accessibility
  • 43D chromatin structure
  • 4Transcription
  • 1DNA methylation
Target of assay
  • 49histone
  • 49histone modification
  • 34broad histone mark
  • 17control
  • 15narrow histone mark
Date released
  • 69October, 2019
  • 32June, 2019
  • 7May, 2019
  • 6February, 2021
  • 5July, 2019
Available data
  • 114bam
  • 92bed narrowPeak
  • 91bigWig
  • 84bigBed narrowPeak
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 4tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 119Homo sapiens
Biosample type
  • 119tissue
Organ
  • 808pancreas
  • 775liver
  • 627connective tissue
  • 474adipose tissue
  • 443epithelium
  • 368heart
  • 335kidney
  • 229vasculature
  • 223blood vessel
  • 215brain
  • 151bone element
  • 137artery
  • 119limb
  • 87musculature of body
  • 67blood
  • 67bodily fluid
  • 58eye
  • 42nerve
  • 35embryo
  • 24spleen
  • 21vein
  • 19lung
  • 18ureter
  • 8skeleton
  • 4gonad
  • 4ovary
  • 1bone marrow
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1thymus
Project
  • 119AMP
Genome assembly (visualization)
  • 96GRCh38
  • 96hg19
Lab
  • 119AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

119 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
total RNA-seq
WGBS
tissue
tibial nerve35214
tibial artery2321
muscle of leg7131
muscle of arm17
gastrocnemius medialis4
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