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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 61ChIP-seq
  • 36DNase-seq
  • 8ATAC-seq
  • 4Hi-C
  • 4total RNA-seq
  • 1WGBS
Assay category
  • 61DNA binding
  • 44DNA accessibility
  • 43D chromatin structure
  • 4Transcription
  • 1DNA methylation
Target of assay
  • 45histone
  • 45histone modification
  • 32broad histone mark
  • 16control
  • 13narrow histone mark
Date released
  • 65October, 2019
  • 32June, 2019
  • 6February, 2021
  • 6May, 2019
  • 5July, 2019
Available data
  • 109bam
  • 88bed narrowPeak
  • 87bigWig
  • 80bigBed narrowPeak
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 4tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 114Homo sapiens
Biosample type
  • 114tissue
Organ
  • 745pancreas
  • 616connective tissue
  • 474adipose tissue
  • 365liver
  • 355epithelium
  • 352heart
  • 296kidney
  • 190brain
  • 187vasculature
  • 186blood vessel
  • 150bone element
  • 130artery
  • 114limb
  • 74musculature of body
  • 54eye
  • 42nerve
  • 24embryo
  • 24spleen
  • 19lung
  • 18ureter
  • 11blood
  • 11bodily fluid
  • 8skeleton
  • 4gonad
  • 4ovary
  • 3vein
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
Project
  • 114AMP
Genome assembly (visualization)
  • 92GRCh38
  • 92hg19
Lab
  • 114AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

114 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
total RNA-seq
WGBS
tissue
tibial nerve35214
tibial artery1921
muscle of leg6131
muscle of arm17
gastrocnemius medialis4
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