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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
Hi-C
4
total RNA-seq
1
WGBS
Assay category
61
DNA binding
44
DNA accessibility
4
3D chromatin structure
4
Transcription
1
DNA methylation
Target of assay
45
histone
45
histone modification
32
broad histone mark
16
control
13
narrow histone mark
Date released
65
October, 2019
32
June, 2019
6
February, 2021
6
May, 2019
5
July, 2019
Available data
109
bam
88
bed narrowPeak
87
bigWig
80
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
114
Homo sapiens
Biosample type
114
tissue
Organ
745
pancreas
616
connective tissue
474
adipose tissue
365
liver
355
epithelium
352
heart
296
kidney
190
brain
187
vasculature
186
blood vessel
150
bone element
130
artery
114
limb
74
musculature of body
54
eye
42
nerve
24
embryo
24
spleen
19
lung
18
ureter
11
blood
11
bodily fluid
8
skeleton
4
gonad
4
ovary
3
vein
1
lymph node
1
pituitary gland
1
skin of body
Project
114
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
114
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
total RNA-seq
WGBS
tissue
tibial nerve
35
2
1
4
tibial artery
19
2
1
muscle of leg
6
13
1
muscle of arm
17
gastrocnemius medialis
4
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