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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 36DNase-seq
  • 17ChIP-seq
  • 8ATAC-seq
  • 7total RNA-seq
  • 4Hi-C
  • 1WGBS
Assay category
  • 44DNA accessibility
  • 17DNA binding
  • 7Transcription
  • 43D chromatin structure
  • 1DNA methylation
Target of assay
  • histone
  • 49histone modification
  • 34broad histone mark
  • 17control
  • 15narrow histone mark
Date released
  • 32June, 2019
  • 26October, 2019
  • 6February, 2021
  • 5July, 2019
  • 3February, 2020
  • 1May, 2019
Available data
  • 66bam
  • 44bed narrowPeak
  • 43bigWig
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 36bigBed narrowPeak
  • 7tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 73Homo sapiens
Biosample type
  • 73tissue
Organ
  • 795pancreas
  • 689liver
  • 606connective tissue
  • 459adipose tissue
  • 384epithelium
  • 324kidney
  • 296heart
  • 165vasculature
  • 160blood vessel
  • 159bone element
  • 121artery
  • 99brain
  • 73limb
  • 68blood
  • 68bodily fluid
  • 64musculature of body
  • 58eye
  • 25embryo
  • 20lung
  • 19nerve
  • 19spleen
  • 18ureter
  • 16skeleton
  • 7vein
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1ovary
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 73AMP
Genome assembly (visualization)
  • 49GRCh38
  • 48hg19
Lab
  • 73AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
target.investigated_as!
  • histone
BIOSAMPLE
ASSAY

73 results

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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve21115
muscle of arm17
muscle of leg1311
tibial artery2511
gastrocnemius medialis14
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
forelimb muscle1
hindlimb muscle1
proximal epiphysis of femur1
proximal epiphysis of humerus1
proximal epiphysis of tibia1
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