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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 36DNase-seq
  • 17ChIP-seq
  • 8ATAC-seq
  • 7total RNA-seq
  • 4Hi-C
  • 1WGBS
Assay category
  • 44DNA accessibility
  • 17DNA binding
  • 7Transcription
  • 43D chromatin structure
  • 1DNA methylation
Target of assay
  • 49histone
  • histone modification
  • 34broad histone mark
  • 17control
  • 15narrow histone mark
Date released
  • 32June, 2019
  • 26October, 2019
  • 6February, 2021
  • 5July, 2019
  • 3February, 2020
  • 1May, 2019
Available data
  • 66bam
  • 44bed narrowPeak
  • 43bigWig
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 36bigBed narrowPeak
  • 7tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 73Homo sapiens
Biosample type
  • 73tissue
Organ
  • 795pancreas
  • 688liver
  • 606connective tissue
  • 459adipose tissue
  • 431epithelium
  • 324kidney
  • 296heart
  • 165vasculature
  • 160blood vessel
  • 159bone element
  • 121artery
  • 99brain
  • 73limb
  • 68blood
  • 68bodily fluid
  • 63musculature of body
  • 58eye
  • 25embryo
  • 20lung
  • 19nerve
  • 19spleen
  • 18ureter
  • 16skeleton
  • 7vein
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1ovary
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 73AMP
Genome assembly (visualization)
  • 49GRCh38
  • 48hg19
Lab
  • 73AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
target.investigated_as!
  • histone modification
BIOSAMPLE
ASSAY

73 results

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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve21115
muscle of arm17
muscle of leg1311
tibial artery2511
gastrocnemius medialis14
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