Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 46target gene predictions
  • 32candidate regulatory elements
  • 30differential activity
  • 24accessible chromatin
  • 15chromatin state
  • 10histone modifications
  • 8eQTL
  • 6binding sites
  • 3Fine-mapped variants
  • 3gene expression
  • 1caQTL
  • 1variant allelic effects
Date released
  • 43July, 2026
  • 40September, 2022
  • 30May, 2026
  • 20February, 2021
  • 12May, 2024
  • 7August, 2021
  • 6March, 2020
  • 4June, 2020
  • 3August, 2017
  • 2February, 2020
  • 2January, 2020
  • 2May, 2021
  • 2May, 2022
  • 1January, 2022
  • 1May, 2020
  • 1November, 2019
  • 1November, 2021
  • 1October, 2022
  • 1September, 2018
Available data
  • 126bed bed3+
  • 12bed bed9
  • 7tsv
  • 5bigWig
  • 1bam
  • 1bigBed bed9
Organism
  • 179Homo sapiens
Collection Tags
  • 36EpiMap
  • 30pyxis
  • 28HDMA
  • 15ENCODE-rE2G
  • 14AMP
  • 14ChIP-Atlas
  • 12 T2DKP
  • 12FNIH_projects-liver
  • 11DGA
  • 10ENCODE
  • 10T2DKP
  • 5GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 81primary cell
  • 65tissue
  • 32cell line
  • 1in vitro differentiated cells
Organ
  • 3365blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • epithelium
  • 903brain
  • 756kidney
  • 518connective tissue
  • 488heart
  • 440lung
  • 386musculature of body
  • 358intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 240liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 178AMP
  • 1ENCODE
Genome assembly (visualization)
  • 99hg19
  • 81GRCh38
  • 2hg18
organ_slims!
  • epithelium
BIOSAMPLE
TYPE

179 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
differential activity
accessible chromatin
chromatin state
histone modifications
eQTL
binding sites
Fine-mapped variants
gene expression
caQTL
variant allelic effects
primary cell
hepatic stellate cell32441111
hepatocyte5144
endothelial cell1141
cholangiocyte141
B cell14
tissue
liver12134927111
right lobe of liver621131
left lobe of liver1
cell line
HepG2522253
HuH-7211111
HuH-7.5211
hepatic stellate cell11
in vitro differentiated cells
hepatocyte1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego