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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
283
ChIP-seq
Assay category
283
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
210
November, 2017
30
November, 2018
29
December, 2017
10
August, 2021
4
August, 2017
Available data
280
bigWig
276
bed narrowPeak
273
fastq
272
bam
262
bigBed narrowPeak
40
bed broadPeak
40
bigBed broadPeak
2
bed bed3+
2
tar
Organism
283
Homo sapiens
Biosample type
246
cell line
37
tissue
Organ
283
liver
43
blood
43
bodily fluid
30
connective tissue
12
adipose tissue
10
pancreas
7
kidney
6
heart
6
spleen
4
artery
4
blood vessel
4
vasculature
3
embryo
1
epithelium
Project
283
AMP
Genome assembly (visualization)
277
hg19
238
GRCh38
Lab
273
AMP-T2D consortium
10
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
9
inconsistent control read length
5
inconsistent control run_type
organ_slims!
limb
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
283 results
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Clear Filters
ChIP-seq
cell line
HepG2
246
tissue
liver
36
right lobe of liver
1
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