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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
38
candidate regulatory elements
26
target gene predictions
23
chromatin state
14
histone modifications
12
accessible chromatin
12
binding sites
8
eQTL
3
Fine-mapped variants
3
gene expression
1
caQTL
1
differential activity
1
variant allelic effects
Date released
64
September, 2022
37
February, 2021
7
August, 2021
6
June, 2020
6
March, 2020
3
August, 2017
3
May, 2021
3
October, 2022
2
February, 2020
2
January, 2020
2
May, 2022
1
February, 2024
1
January, 2022
1
May, 2020
1
May, 2024
1
November, 2019
1
November, 2021
1
September, 2018
Available data
105
bed bed3+
20
bed bed9
8
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
142
Homo sapiens
Biosample type
64
cell line
60
tissue
18
primary cell
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
141
AMP
1
ENCODE
Genome assembly (visualization)
134
hg19
35
GRCh38
2
hg18
organ_slims!
epithelium
spinal cord
BIOSAMPLE
TYPE
142 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
binding sites
eQTL
Fine-mapped variants
gene expression
caQTL
differential activity
variant allelic effects
cell line
MCF-7
9
6
5
2
1
3
HepG2
2
3
2
5
2
3
T47D
3
2
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
+ See 2 more…
tissue
liver
13
10
9
2
4
1
7
1
1
1
right lobe of liver
2
1
1
1
3
1
mammary gland
1
1
primary cell
hepatic stellate cell
2
1
1
1
3
1
1
fibroblast of mammary gland
2
1
1
1
1
2
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