Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
target gene predictions
22
candidate regulatory elements
16
chromatin state
11
accessible chromatin
11
histone modifications
9
eQTL
6
binding sites
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
43
September, 2022
21
February, 2021
12
May, 2021
7
August, 2021
6
March, 2020
5
June, 2020
3
August, 2017
2
February, 2020
2
January, 2020
2
January, 2022
2
May, 2022
1
February, 2024
1
March, 2024
1
May, 2020
1
May, 2024
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
81
bed bed3+
13
bed bed9
9
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
113
Homo sapiens
Biosample type
61
tissue
38
cell line
10
primary cell
4
in vitro differentiated cells
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
112
AMP
1
ENCODE
Genome assembly (visualization)
103
hg19
29
GRCh38
2
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
113 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
liver
10
13
9
4
2
7
1
1
1
1
right lobe of liver
1
2
1
1
1
3
pituitary gland
1
1
pituitary
1
cell line
HepG2
3
2
2
2
5
3
pituitary stalk
10
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
1
2
1
3
1
1
1
in vitro differentiated cells
olfactory neurosphere cell line
1
1
1
1
Download