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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
347
transcription factor
178
histone modification
177
histone
130
control
90
narrow histone mark
87
broad histone mark
82
recombinant protein
63
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
16
October, 2019
14
May, 2019
13
August, 2017
9
November, 2017
7
December, 2017
4
August, 2021
Available data
77
bigWig
76
bam
76
bed narrowPeak
40
tagAlign
39
bigBed narrowPeak
21
fastq
8
bed broadPeak
8
bigBed broadPeak
2
bed bed3+
Organism
90
Homo sapiens
Biosample type
66
tissue
10
primary cell
9
cell line
5
in vitro differentiated cells
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
0
stomach
Project
90
AMP
Genome assembly (visualization)
77
hg19
66
GRCh38
Lab
88
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
tissue
liver
42
aorta
4
ascending aorta
4
islet of Langerhans
4
thoracic aorta
4
+ See 3 more…
primary cell
endothelial cell of umbilical vein
6
hepatocyte
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
5
See all biosamples
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