Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
54
candidate regulatory elements
38
target gene predictions
33
chromatin state
28
accessible chromatin
24
gene expression
17
histone modifications
16
binding sites
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
94
September, 2022
44
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
7
June, 2020
7
November, 2021
4
March, 2023
4
May, 2021
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
May, 2022
2
May, 2024
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
159
bed bed3+
30
bed bed9
28
tsv
25
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
231
Homo sapiens
Biosample type
118
tissue
75
primary cell
31
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
224
AMP
7
ENCODE
Genome assembly (visualization)
198
hg19
81
GRCh38
2
hg18
organ_slims!
artery
ureter
BIOSAMPLE
TYPE
231 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
placenta
26
15
14
1
2
1
1
liver
13
10
9
4
1
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
2
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
1
3
1
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
pancreatic endothelial cell
1
3
+ See 3 more…
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HTR-8/Svneo
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download