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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
52
candidate regulatory elements
36
target gene predictions
30
chromatin state
29
accessible chromatin
25
gene expression
21
binding sites
21
histone modifications
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
85
September, 2022
55
February, 2021
30
February, 2024
10
August, 2021
10
June, 2020
10
March, 2020
5
May, 2021
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
May, 2022
2
May, 2024
1
July, 2020
1
March, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
166
bed bed3+
29
tsv
27
bed bed9
23
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
236
Homo sapiens
Biosample type
81
cell line
75
primary cell
73
tissue
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
231
AMP
5
ENCODE
Genome assembly (visualization)
202
hg19
76
GRCh38
2
hg18
organ_slims!
blood
penis
BIOSAMPLE
TYPE
236 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
HepG2
2
3
2
2
3
5
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 9 more…
primary cell
hepatocyte
2
3
1
8
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
1
3
1
1
1
epithelial cell of prostate
4
3
2
pancreatic endothelial cell
1
3
+ See 2 more…
tissue
liver
13
10
9
4
1
1
2
7
1
1
prostate gland
4
2
2
1
2
2
1
right lobe of liver
2
1
1
1
1
3
prostate
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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