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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
candidate regulatory elements
42
target gene predictions
34
chromatin state
31
accessible chromatin
26
gene expression
21
binding sites
21
histone modifications
10
eQTL
6
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
97
September, 2022
59
February, 2021
31
February, 2024
11
June, 2020
10
August, 2021
10
March, 2020
7
November, 2021
6
May, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
January, 2022
3
May, 2020
2
February, 2020
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
181
bed bed3+
31
bed bed9
30
tsv
24
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
257
Homo sapiens
Biosample type
93
tissue
81
cell line
76
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
250
AMP
7
ENCODE
Genome assembly (visualization)
221
hg19
81
GRCh38
2
hg18
organ_slims!
nose
thymus
BIOSAMPLE
TYPE
257 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
liver
13
10
9
4
1
1
2
7
1
1
thyroid gland
8
5
4
1
1
prostate gland
4
2
2
1
2
2
1
right lobe of liver
2
1
1
1
1
3
prostate
1
+ See 1 more…
cell line
HepG2
2
3
2
2
3
5
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 9 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
epithelial cell of prostate
4
3
2
hepatic stellate cell
1
1
1
3
1
1
1
pancreatic endothelial cell
1
3
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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