Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
32
accessible chromatin
29
candidate regulatory elements
24
gene expression
24
target gene predictions
20
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
55
September, 2022
35
February, 2021
29
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
118
bed bed3+
31
bigWig
28
tsv
17
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
176
Homo sapiens
Biosample type
76
tissue
65
primary cell
28
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
171
AMP
5
ENCODE
Genome assembly (visualization)
144
hg19
73
GRCh38
2
hg18
organ_slims!
brain
penis
BIOSAMPLE
TYPE
176 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
4
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
femur
2
1
1
arm bone
1
1
1
leg bone
1
1
1
+ See 8 more…
primary cell
hepatocyte
8
2
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
2
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download