Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
72
candidate regulatory elements
43
target gene predictions
39
chromatin state
13
accessible chromatin
11
histone modifications
9
eQTL
6
binding sites
5
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
109
September, 2022
49
February, 2021
7
August, 2021
7
June, 2020
7
March, 2020
4
August, 2017
4
May, 2021
2
February, 2020
2
January, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
February, 2024
1
May, 2020
1
May, 2024
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
149
bed bed3+
35
bed bed9
10
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
204
Homo sapiens
Biosample type
166
tissue
28
cell line
10
primary cell
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
203
AMP
1
ENCODE
Genome assembly (visualization)
193
hg19
51
GRCh38
2
hg18
organ_slims!
epithelium
gonad
BIOSAMPLE
TYPE
204 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
tissue
stomach
40
21
19
3
1
1
1
liver
13
10
9
4
2
7
1
1
1
1
right lobe of liver
2
1
1
1
1
3
stomach smooth muscle
4
2
3
gastroesophageal sphincter
5
1
1
+ See 3 more…
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
2
1
1
3
1
1
1
See all biosamples
Download