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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
50
gene expression
45
target gene predictions
44
chromatin state
43
accessible chromatin
22
binding sites
19
differential activity
18
histone modifications
14
variant allelic effects
12
eQTL
9
Fine-mapped variants
1
caQTL
Date released
106
September, 2022
61
February, 2021
35
September, 2023
32
February, 2024
19
March, 2020
13
January, 2020
13
May, 2020
11
August, 2021
9
June, 2020
8
November, 2021
4
August, 2017
4
February, 2020
4
March, 2023
4
May, 2021
4
May, 2024
3
April, 2020
3
January, 2022
3
November, 2019
3
October, 2022
2
May, 2022
2
October, 2019
1
July, 2020
1
March, 2024
1
September, 2018
Available data
213
bed bed3+
77
tsv
40
bed bed9
38
bigWig
8
bigBed bed9
3
csv
2
txt
1
bam
Organism
346
Homo sapiens
Biosample type
183
primary cell
121
tissue
33
cell line
9
in vitro differentiated cells
Organ
959
epithelium
652
kidney
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
300
AMP
35
KPMP
8
ENCODE
3
LungMap
Genome assembly (visualization)
270
hg19
112
GRCh38
2
hg18
organ_slims!
connective tissue
heart
BIOSAMPLE
TYPE
346 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
13
3
1
8
1
4
2
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 23 more…
tissue
liver
13
1
10
9
4
1
1
2
7
1
tibial artery
3
1
2
3
3
2
2
3
ascending aorta
4
1
2
3
1
1
1
3
aorta
4
1
4
4
thoracic aorta
4
2
3
1
1
+ See 5 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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