Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
candidate regulatory elements
55
gene expression
53
accessible chromatin
52
target gene predictions
50
chromatin state
27
binding sites
22
histone modifications
19
differential activity
19
variant allelic effects
14
eQTL
12
Fine-mapped variants
4
caQTL
Date released
121
September, 2022
74
February, 2021
35
September, 2023
32
February, 2024
22
March, 2020
19
January, 2020
18
May, 2020
11
August, 2021
11
June, 2020
8
November, 2021
7
February, 2020
6
May, 2021
5
May, 2024
5
October, 2022
4
August, 2017
4
February, 2023
4
January, 2022
4
March, 2023
4
November, 2019
3
April, 2020
2
May, 2022
2
October, 2019
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
255
bed bed3+
84
tsv
47
bigWig
46
bed bed9
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
405
Homo sapiens
Biosample type
215
primary cell
142
tissue
39
cell line
9
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
359
AMP
35
KPMP
8
ENCODE
3
LungMap
Genome assembly (visualization)
319
hg19
135
GRCh38
2
hg18
organ_slims!
extraembryonic component
musculature of body
BIOSAMPLE
TYPE
405 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
13
8
3
1
1
4
2
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
2
1
3
1
1
1
1
+ See 28 more…
tissue
liver
13
1
4
10
9
1
2
1
7
1
coronary artery
3
1
3
3
3
2
2
3
1
tibial artery
3
1
3
2
3
2
2
3
ascending aorta
4
1
1
2
3
1
1
3
aorta
4
1
4
4
+ See 6 more…
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download