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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
55
gene expression
53
accessible chromatin
48
target gene predictions
46
chromatin state
26
binding sites
21
histone modifications
19
differential activity
19
variant allelic effects
14
eQTL
12
Fine-mapped variants
4
caQTL
Date released
109
September, 2022
66
February, 2021
35
September, 2023
32
February, 2024
22
March, 2020
19
January, 2020
18
May, 2020
11
August, 2021
10
June, 2020
9
November, 2021
7
February, 2020
6
May, 2021
5
May, 2024
5
October, 2022
4
August, 2017
4
February, 2023
4
January, 2022
4
March, 2023
4
November, 2019
3
April, 2020
2
May, 2022
2
October, 2019
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
239
bed bed3+
84
tsv
48
bigWig
42
bed bed9
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
385
Homo sapiens
Biosample type
199
primary cell
142
tissue
37
cell line
7
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
338
AMP
35
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
299
hg19
132
GRCh38
2
hg18
organ_slims!
intestine
skin of body
BIOSAMPLE
TYPE
385 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
13
8
3
1
1
4
2
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
2
1
3
1
1
1
1
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 27 more…
tissue
liver
13
1
4
10
9
1
2
1
7
1
coronary artery
3
1
3
3
3
2
2
3
1
tibial artery
3
1
3
2
3
2
2
3
ascending aorta
4
1
1
2
3
1
1
3
aorta
4
1
4
4
+ See 6 more…
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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