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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 26gene expression
  • 24accessible chromatin
  • 22target gene predictions
  • 17candidate regulatory elements
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 10eQTL
  • 7differential activity
  • 4Fine-mapped variants
  • 4variant allelic effects
  • 1caQTL
Date released
  • 46September, 2022
  • 29February, 2024
  • 17February, 2021
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 5March, 2025
  • 5November, 2021
  • 5October, 2025
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 2May, 2024
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 99bed bed3+
  • 33tsv
  • 23bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 159Homo sapiens
Collection Tags
  • 47DGA
  • 42EpiMap
  • 34AMP
  • 18T2DKP
  • 17ChIP-Atlas
  • 14 T2DKP
  • 11STARNET
  • 5GTEx
  • 4HPAP
  • 2ENCODE
  • 2FNIH_projects-liver
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 65primary cell
  • 61tissue
  • 27cell line
  • 6in vitro differentiated cells
Organ
  • 2892vasculature
  • 2837bodily fluid
  • 2833blood vessel
  • 2828blood
  • 2654vein
  • 909epithelium
  • 568kidney
  • 447connective tissue
  • 416brain
  • 319musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 159liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 93adipose tissue
  • 91stomach
  • 80artery
  • 78bone element
  • 78uterus
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 154AMP
  • 5ENCODE
Genome assembly (visualization)
  • 117hg19
  • 63GRCh38
  • 2hg18
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

159 results

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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
primary cell
hepatocyte138321412
endothelial cell of hepatic sinusoid466
hepatic stellate cell1312111
pancreatic endothelial cell13
Liver fetal (hepatocyte)1
tissue
liver341189219411
right lobe of liver111113
cell line
HepG2231253
HuH-7111111
HuH-7.5111
hepatic stellate cell11
in vitro differentiated cells
hepatocyte111
hepatocyte(AFP)3
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