Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 50target gene predictions
  • 35candidate regulatory elements
  • 33differential activity
  • 24gene expression
  • 17chromatin state
  • 14accessible chromatin
  • 8eQTL
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 2binding sites
  • 1caQTL
Date released
  • 43July, 2026
  • 42September, 2022
  • 30May, 2026
  • 13February, 2021
  • 13February, 2024
  • 12May, 2024
  • 10March, 2020
  • 7August, 2021
  • 4March, 2023
  • 3August, 2017
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 1January, 2020
  • 1January, 2022
  • 1July, 2020
  • 1May, 2022
  • 1November, 2021
  • 1October, 2022
Available data
  • 112bed bed3+
  • 27tsv
  • 14bed bed9
  • 9bigWig
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 191Homo sapiens
Collection Tags
  • 42EpiMap
  • 30DGA
  • 30pyxis
  • 28HDMA
  • 17AMP
  • 15ENCODE-rE2G
  • 13 T2DKP
  • 12FNIH_projects-liver
  • 11ENCODE
  • 8T2DKP
  • 5GTEx
  • 4HPAP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 106primary cell
  • 58tissue
  • 19cell line
  • 8in vitro differentiated cells
Organ
  • 3303blood
  • 2845vasculature
  • 2818blood vessel
  • 2789bodily fluid
  • 2655vein
  • 805brain
  • 698kidney
  • 681epithelium
  • 451heart
  • 419lung
  • 387connective tissue
  • 342musculature of body
  • 324intestine
  • 256skin of body
  • 246pancreas
  • 220limb
  • 206large intestine
  • 191liver
  • 180embryo
  • 158extraembryonic component
  • 132adipose tissue
  • 131stomach
  • 111muscle organ
  • 95adrenal gland
  • 94eye
  • 94small intestine
  • 89thymus
  • 88placenta
  • 85uterus
  • 83mammary gland
  • 78bone element
  • 69ureter
  • 67artery
  • 67prostate gland
  • 60__MARKER__
  • 60spleen
  • 56gonad
  • 51penis
  • 46spinal cord
  • 45thyroid gland
  • 44esophagus
  • 40lymph node
  • 30ovary
  • 26testis
  • 22nerve
  • 21lymphoid tissue
  • 20mouth
  • 16skeleton
  • 15lymphatic vessel
  • 14breast
  • 12pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11bronchus
  • 11tongue
  • 7bone marrow
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 190AMP
  • 1ENCODE
Genome assembly (visualization)
  • 87hg19
  • 84GRCh38
  • 2hg18
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

191 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
differential activity
gene expression
chromatin state
accessible chromatin
eQTL
variant allelic effects
Fine-mapped variants
binding sites
caQTL
primary cell
hepatocyte82413142
hepatic stellate cell3241111
endothelial cell1141
cholangiocyte141
B cell14
tissue
liver12131971
right lobe of liver621113
left lobe of liver1
cell line
HepG25222
HuH-7211
HuH-7.5211
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego