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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58ChIP-seq
Assay category
  • 58DNA binding
Target of assay
  • 338transcription factor
  • 108control
  • 103histone modification
  • 102histone
  • 82recombinant protein
  • 60narrow histone mark
  • 58RNA binding protein
  • 42broad histone mark
  • 23chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 34November, 2017
  • 19November, 2018
  • 4December, 2017
  • 1August, 2021
Available data
  • 57bam
  • 57fastq
  • 56bed narrowPeak
  • 56bigWig
  • 55bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1tar
Organism
  • 58Homo sapiens
Biosample type
  • 54cell line
  • 2in vitro differentiated cells
  • 2tissue
Organ
  • 58liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 9pancreas
  • 8epithelium
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 58AMP
Genome assembly (visualization)
  • 55hg19
  • 51GRCh38
Lab
  • 57AMP-T2D consortium
  • 1Bing Ren, UCSD
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
BIOSAMPLE
ASSAY

58 results

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Clear Filters
ChIP-seq
cell line
HepG254
in vitro differentiated cells
hepatocyte2
tissue
liver1
right lobe of liver1
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