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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 42ChIP-seq
Assay category
  • 42DNA binding
Target of assay
  • 338transcription factor
  • 108control
  • 103histone modification
  • 102histone
  • 82recombinant protein
  • 60narrow histone mark
  • 58RNA binding protein
  • 42broad histone mark
  • 23chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 19August, 2017
  • 10December, 2017
  • 8November, 2017
  • 3October, 2019
  • 2August, 2021
Available data
  • 30bigWig
  • 29bam
  • 29bed narrowPeak
  • 25fastq
  • 21bigBed narrowPeak
  • 18tagAlign
  • 8bed broadPeak
  • 8bigBed broadPeak
  • 1bed bed3+
Organism
  • 42Homo sapiens
Biosample type
  • 25tissue
  • 9cell line
  • 7in vitro differentiated cells
  • 1primary cell
Organ
  • 78pancreas
  • 70brain
  • 57heart
  • 45blood vessel
  • 45vasculature
  • 44connective tissue
  • 44epithelium
  • 42liver
  • 34limb
  • 20adipose tissue
  • 20musculature of body
  • 16nerve
  • 15kidney
  • 14artery
  • 9vein
  • 4embryo
  • 4spleen
Project
  • 42AMP
Genome assembly (visualization)
  • 30hg19
  • 28GRCh38
Lab
  • 41AMP-T2D consortium
  • 1Bing Ren, UCSD
Audit category:
  • 6inconsistent control read length
BIOSAMPLE
ASSAY

42 results

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Clear Filters
ChIP-seq
tissue
liver22
right lobe of liver3
cell line
HepG29
in vitro differentiated cells
hepatocyte7
primary cell
hepatocyte1
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