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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 23ChIP-seq
Assay category
  • 23DNA binding
Target of assay
  • 338transcription factor
  • 108control
  • 103histone modification
  • 102histone
  • 82recombinant protein
  • 60narrow histone mark
  • 58RNA binding protein
  • 42broad histone mark
  • 23chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 15November, 2017
  • 5November, 2018
  • 3December, 2017
Available data
  • 23bam
  • 23bed narrowPeak
  • 23bigBed narrowPeak
  • 23bigWig
  • 23fastq
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 23Homo sapiens
Biosample type
  • 20cell line
  • 2tissue
  • 1in vitro differentiated cells
Organ
  • 23liver
  • 10blood
  • 10bodily fluid
  • 2connective tissue
  • 1epithelium
Project
  • 23AMP
Genome assembly (visualization)
  • 23hg19
  • 21GRCh38
Lab
  • 23AMP-T2D consortium
Audit category:
  • 2inconsistent control
Audit category:
  • 6missing controlled_by
Audit category:
  • 11inconsistent control read length
  • 8inconsistent control run_type
BIOSAMPLE
ASSAY

23 results

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Clear Filters
ChIP-seq
cell line
HepG220
tissue
liver2
in vitro differentiated cells
hepatocyte1
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