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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 102ChIP-seq
Assay category
  • 102DNA binding
Target of assay
  • 338transcription factor
  • 108control
  • 103histone modification
  • 102histone
  • 82recombinant protein
  • 60narrow histone mark
  • 58RNA binding protein
  • 42broad histone mark
  • 23chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 32August, 2017
  • 27May, 2020
  • 17December, 2017
  • 15November, 2017
  • 6August, 2021
  • 5October, 2019
Available data
  • 82bigWig
  • 80bed narrowPeak
  • 79bam
  • 58tagAlign
  • 44fastq
  • 35bigBed narrowPeak
  • 14bed broadPeak
  • 14bigBed broadPeak
  • 3bed bed3+
Organism
  • 102Homo sapiens
Biosample type
  • 69tissue
  • 18cell line
  • 12in vitro differentiated cells
  • 3primary cell
Organ
  • 187brain
  • 151pancreas
  • 102liver
  • 97heart
  • 93epithelium
  • 78connective tissue
  • 71vasculature
  • 70blood vessel
  • 49limb
  • 33musculature of body
  • 32adipose tissue
  • 30kidney
  • 24nerve
  • 20artery
  • 15vein
  • 12embryo
  • 6spleen
  • 4gonad
  • 4ovary
  • 3eye
  • 1blood
  • 1bodily fluid
  • 1lymph node
  • 1pituitary gland
Project
  • 102AMP
Genome assembly (visualization)
  • 82hg19
  • 69GRCh38
Lab
  • 99AMP-T2D consortium
  • 3Bing Ren, UCSD
Audit category:
  • 1missing controlled_by
Audit category:
  • 12inconsistent control read length
BIOSAMPLE
ASSAY

102 results

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Clear Filters
ChIP-seq
tissue
liver64
right lobe of liver5
cell line
HepG218
in vitro differentiated cells
hepatocyte12
primary cell
hepatocyte3
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