Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 131candidate regulatory elements
  • 71chromatin state
  • 71target gene predictions
  • 15accessible chromatin
  • 9binding sites
  • 4histone modifications
  • 1eQTL
  • 1gene expression
  • 1variant allelic effects
Date released
  • 210September, 2022
  • 70February, 2021
  • 6June, 2020
  • 6November, 2021
  • 4October, 2022
  • 3April, 2020
  • 1August, 2017
  • 1February, 2024
  • 1January, 2022
  • 1March, 2020
  • 1March, 2024
Available data
  • 233bed bed3+
  • 70bed bed9
  • 9bigWig
  • 1tsv
Organism
  • 304Homo sapiens
Collection Tags
  • 210EpiMap
  • 65ENCODE
  • 15ChIP-Atlas
  • 6AMP
  • 6T2DKP
  • 2DGA
  • 1GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 181tissue
  • 93cell line
  • 30primary cell
Organ
  • 2909vasculature
  • 2855bodily fluid
  • 2845blood vessel
  • 2844blood
  • 2657vein
  • 899epithelium
  • 652kidney
  • 456brain
  • 449connective tissue
  • 371musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 159liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 96adipose tissue
  • 89bone element
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 77artery
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 295AMP
  • 6ENCODE
  • 3LungMap
Genome assembly (visualization)
  • 302hg19
  • 77GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

304 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
lung33161711
left lung261313
right lung2211111
upper lobe of left lung733111
cell line
A549211818121
IMR-90211121
PC-9211111
WI38511
NCI-H226 cell1111
primary cell
fibroblast of lung6432
lung microvascular endothelial cell311
type II pneumocyte41
type I pneumocyte3
endothelial cell of artery1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego