Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 189target gene predictions
  • 131candidate regulatory elements
  • 71chromatin state
  • 21accessible chromatin
  • 4binding sites
  • 1eQTL
  • 1gene expression
  • 1variant allelic effects
Date released
  • 210September, 2022
  • 129July, 2026
  • 61February, 2021
  • 4May, 2021
  • 4October, 2022
  • 3April, 2020
  • 3November, 2021
  • 1August, 2017
  • 1February, 2024
  • 1January, 2022
  • 1March, 2020
  • 1March, 2024
Available data
  • 348bed bed3+
  • 70bed bed9
  • 3bigWig
  • 1tsv
Organism
  • 419Homo sapiens
Collection Tags
  • 210EpiMap
  • 93ENCODE-rE2G
  • 65ENCODE
  • 36HDMA
  • 6DGA
  • 3AMP
  • 3T2DKP
  • 1GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 229tissue
  • 118cell line
  • 72primary cell
Organ
  • 3303blood
  • 2845vasculature
  • 2818blood vessel
  • 2789bodily fluid
  • 2655vein
  • 805brain
  • 698kidney
  • 681epithelium
  • 451heart
  • 419lung
  • 387connective tissue
  • 342musculature of body
  • 324intestine
  • 256skin of body
  • 246pancreas
  • 220limb
  • 206large intestine
  • 191liver
  • 180embryo
  • 158extraembryonic component
  • 132adipose tissue
  • 131stomach
  • 111muscle organ
  • 95adrenal gland
  • 94eye
  • 94small intestine
  • 89thymus
  • 88placenta
  • 85uterus
  • 83mammary gland
  • 78bone element
  • 69ureter
  • 67artery
  • 67prostate gland
  • 60__MARKER__
  • 60spleen
  • 56gonad
  • 51penis
  • 46spinal cord
  • 45thyroid gland
  • 44esophagus
  • 40lymph node
  • 30ovary
  • 26testis
  • 22nerve
  • 21lymphoid tissue
  • 20mouth
  • 16skeleton
  • 15lymphatic vessel
  • 14breast
  • 12pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11bronchus
  • 11tongue
  • 7bone marrow
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 413AMP
  • 3ENCODE
  • 3LungMap
Genome assembly (visualization)
  • 288hg19
  • 203GRCh38
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

419 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
variant allelic effects
tissue
lung31331611
left lung282613
right lung222211
upper lobe of left lung1073
lower lobe of left lung3
cell line
A5493321181
WI38351
IMR-904211
H97
PC-9421
primary cell
fibroblast of lung6642
progenitor cell55
lung microvascular endothelial cell331
fibroblast22
lung multiciliated epithelial cell22
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego