Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 7candidate regulatory elements
  • 4accessible chromatin
  • 3gene expression
  • 2binding sites
  • 2chromatin state
  • 2differential activity
  • 2target gene predictions
  • 1histone modifications
Date released
  • 6September, 2022
  • 5February, 2021
  • 5September, 2023
  • 3May, 2024
  • 2November, 2021
  • 1April, 2020
  • 1June, 2020
Available data
  • 16bed bed3+
  • 5tsv
  • 3bigWig
  • 2bed bed9
Organism
  • 23Homo sapiens
Collection Tags
  • 6EpiMap
  • 5KPMP
  • 4ChIP-Atlas
  • 2AMP
  • 2ENCODE
  • 2FNIH_projects-heart
  • 2T2DKP
  • 1FNIH_projects-liver
Biosample type
  • 19primary cell
  • 2cell line
  • 2in vitro differentiated cells
Organ
  • 2909vasculature
  • 2855bodily fluid
  • 2845blood vessel
  • 2844blood
  • 2657vein
  • 899epithelium
  • 652kidney
  • 456brain
  • 449connective tissue
  • 371musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 159liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 96adipose tissue
  • 89bone element
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 77artery
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 15AMP
  • 5KPMP
  • 2ENCODE
  • 1LungMap
Genome assembly (visualization)
  • 18hg19
  • 7GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

23 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
gene expression
binding sites
chromatin state
differential activity
target gene predictions
histone modifications
primary cell
dermis lymphatic vessel endothelial cell222
endothelial cell of lymphatic vessel33
Lymphatic Endothelial Cell32
dermis microvascular lymphatic vessel endothelial cell2
cell line
dermis lymphatic vessel endothelial cell11
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego