Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 5candidate regulatory elements
  • 4accessible chromatin
  • 3gene expression
  • 3target gene predictions
  • 2binding sites
  • 2chromatin state
  • 2differential activity
  • 1histone modifications
Date released
  • 6September, 2022
  • 5September, 2023
  • 3February, 2021
  • 3May, 2024
  • 3November, 2021
  • 1April, 2020
  • 1June, 2020
Available data
  • 15bed bed3+
  • 5tsv
  • 3bigWig
  • 2bed bed9
Organism
  • 22Homo sapiens
Collection Tags
  • 6EpiMap
  • 5KPMP
  • 4ChIP-Atlas
  • 3AMP
  • 3T2DKP
  • 2FNIH_projects-heart
  • 1FNIH_projects-liver
Biosample type
  • 18primary cell
  • 2cell line
  • 2in vitro differentiated cells
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • 2828blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • 440connective tissue
  • 416brain
  • 302musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 13AMP
  • 5KPMP
  • 3ENCODE
  • 1LungMap
Genome assembly (visualization)
  • 17hg19
  • 8GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

22 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
gene expression
target gene predictions
binding sites
chromatin state
differential activity
histone modifications
primary cell
endothelial cell of lymphatic vessel331
dermis lymphatic vessel endothelial cell222
Lymphatic Endothelial Cell32
cell line
dermis lymphatic vessel endothelial cell11
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego