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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
41
candidate regulatory elements
28
target gene predictions
24
chromatin state
15
binding sites
10
accessible chromatin
6
histone modifications
3
gene expression
2
variant allelic effects
1
eQTL
Date released
60
September, 2022
38
February, 2021
6
June, 2020
6
November, 2021
4
October, 2022
3
March, 2024
3
May, 2021
2
August, 2017
2
January, 2020
2
March, 2020
2
May, 2020
1
February, 2024
1
January, 2022
Available data
103
bed bed3+
22
bed bed9
4
bigWig
3
tsv
2
bigBed bed9
Organism
130
Homo sapiens
Biosample type
66
primary cell
38
cell line
23
tissue
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
124
AMP
6
ENCODE
Genome assembly (visualization)
125
hg19
30
GRCh38
BIOSAMPLE
TYPE
130 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
eQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
+ See 1 more…
cell line
MCF-7
9
6
5
3
1
2
T47D
3
2
2
MCF 10A
3
vein endothelial cell
1
1
tissue
vagina
4
2
2
1
1
urinary bladder
3
2
2
1
mammary gland
1
1
bladder
1
bladder (urinary bladder)
1
+ See 1 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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