Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
198
candidate regulatory elements
112
target gene predictions
109
chromatin state
60
accessible chromatin
49
gene expression
24
binding sites
20
variant allelic effects
19
differential activity
18
Fine-mapped variants
15
eQTL
14
histone modifications
5
caQTL
Date released
282
September, 2022
139
February, 2021
35
September, 2023
32
February, 2024
24
March, 2020
19
May, 2020
17
January, 2020
17
November, 2021
14
February, 2020
12
June, 2020
9
May, 2021
5
January, 2022
5
October, 2022
4
August, 2017
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
3
March, 2024
3
May, 2019
3
May, 2022
3
October, 2019
2
August, 2021
Available data
437
bed bed3+
105
bed bed9
84
tsv
44
bigWig
12
bigBed bed9
2
txt
Organism
643
Homo sapiens
Biosample type
415
tissue
199
primary cell
25
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
588
AMP
35
KPMP
17
ENCODE
3
LungMap
Genome assembly (visualization)
570
hg19
187
GRCh38
organ_slims!
brain
uterus
BIOSAMPLE
TYPE
643 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
variant allelic effects
differential activity
Fine-mapped variants
eQTL
histone modifications
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
tibial nerve
6
3
4
3
2
2
3
2
coronary artery
3
3
3
3
1
2
3
2
1
+ See 28 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
skeletal muscle satellite cell
2
2
2
5
2
dermis blood vessel endothelial cell
6
2
2
skeletal muscle fiber
5
2
2
+ See 30 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 1 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
myotube
1
1
See all biosamples
Download