Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
185
candidate regulatory elements
132
target gene predictions
97
chromatin state
94
accessible chromatin
60
gene expression
34
differential activity
23
eQTL
18
variant allelic effects
13
binding sites
13
histone modifications
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
266
September, 2022
133
February, 2021
47
March, 2023
40
February, 2024
40
May, 2021
29
November, 2021
20
January, 2021
19
March, 2020
11
June, 2020
11
May, 2020
9
August, 2021
9
January, 2020
8
February, 2020
7
August, 2018
7
October, 2019
6
August, 2017
6
January, 2022
3
March, 2024
3
May, 2022
3
November, 2019
3
October, 2022
2
May, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
466
bed bed3+
91
tsv
90
bed bed9
74
bigWig
14
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
686
Homo sapiens
Biosample type
454
tissue
176
primary cell
51
cell line
5
in vitro differentiated cells
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
635
AMP
29
ENCODE
20
T1D
2
community
Genome assembly (visualization)
585
hg19
165
GRCh38
organ_slims!
lung
BIOSAMPLE
TYPE
686 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
1
3
6
11
13
1
2
1
2
2
2
spleen
15
8
6
2
1
1
1
+ See 30 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
EndoC_BH1
1
8
8
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
2
1
1
1
+ See 4 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
See all biosamples
Download