Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
total RNA-seq
3
RRBS
2
small RNA-seq
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
10
DNA binding
7
Transcription
3
DNA methylation
1
DNA accessibility
Target of assay
9
histone
9
histone modification
5
broad histone mark
4
narrow histone mark
1
control
Date released
9
June, 2019
5
July, 2019
2
August, 2017
2
February, 2020
2
May, 2022
1
March, 2020
1
May, 2019
Available data
14
bam
13
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
7
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
fastq
1
bed bed3+
1
txt
Organism
22
Homo sapiens
Biosample type
12
primary cell
10
tissue
Organ
426
liver
201
pancreas
169
epithelium
96
brain
68
connective tissue
58
blood
58
bodily fluid
58
kidney
49
vasculature
44
blood vessel
41
heart
22
musculature of body
19
vein
17
adipose tissue
13
embryo
11
artery
9
bone element
8
limb
8
skeleton
7
eye
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
17
hg19
13
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
1
audit script error
replication_type!
unreplicated
BIOSAMPLE
ASSAY
22 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
RRBS
small RNA-seq
pCHi-C
single cell RNA-seq
snATAC-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
1
1
tissue
skeletal muscle tissue
1
2
1
1
1
gastrocnemius medialis
1
left ventricle myocardium
1
muscle of leg
1
psoas muscle
1
Download