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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
29
ChIP-seq
6
Hi-C
2
RRBS
2
total RNA-seq
1
ATAC-seq
1
WGBS
1
snATAC-seq
Assay category
35
DNA accessibility
29
DNA binding
6
3D chromatin structure
3
DNA methylation
2
Transcription
Target of assay
24
histone
24
histone modification
15
broad histone mark
9
narrow histone mark
5
control
Date released
34
June, 2019
24
August, 2017
6
May, 2019
5
July, 2019
4
March, 2020
1
January, 2018
1
July, 2025
Available data
55
bigWig
51
bed narrowPeak
46
bed broadPeak
43
bam
38
bigBed narrowPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
3
tsv
2
bedpe bed3+
2
hic
1
bed bedMethyl
1
bigBed bedMethyl
1
tbi
Organism
74
Homo sapiens
Biosample type
73
tissue
2
primary cell
Organ
745
pancreas
616
connective tissue
474
adipose tissue
365
liver
355
epithelium
352
heart
296
kidney
190
brain
187
vasculature
186
blood vessel
150
bone element
130
artery
114
limb
75
musculature of body
54
eye
42
nerve
24
embryo
24
spleen
19
lung
18
ureter
11
blood
11
bodily fluid
8
skeleton
4
gonad
4
ovary
3
vein
1
lymph node
1
pituitary gland
1
skin of body
Project
75
AMP
Genome assembly (visualization)
56
hg19
41
GRCh38
Lab
74
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
75 results
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DNase-seq
ChIP-seq
Hi-C
RRBS
total RNA-seq
ATAC-seq
WGBS
snATAC-seq
tissue
skeletal muscle tissue
22
2
1
1
muscle of leg
13
6
1
muscle of arm
17
gastrocnemius medialis
4
psoas muscle
2
2
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primary cell
skeletal muscle cell
1
1
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