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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 147candidate regulatory elements
  • 74chromatin state
  • 72target gene predictions
  • 31accessible chromatin
  • 13eQTL
  • 13gene expression
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6caQTL
  • 4differential activity
Date released
  • 204September, 2022
  • 92February, 2021
  • 15February, 2024
  • 12July, 2025
  • 9March, 2020
  • 8November, 2021
  • 6February, 2020
  • 6June, 2020
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 5October, 2025
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 275bed bed3+
  • 71bed bed9
  • 27tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 388Homo sapiens
Collection Tags
  • 204EpiMap
  • 79ENCODE
  • 26DGA
  • 25 T2DKP
  • 19ChIP-Atlas
  • 15T2DKP
  • 12GTEx
  • 11STARNET
  • 10AMP
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 312tissue
  • 59primary cell
  • 16cell line
  • 1in vitro differentiated cells
Organ
  • 2914vasculature
  • 2855bodily fluid
  • 2850blood vessel
  • 2844blood
  • 2657vein
  • 902epithelium
  • 652kidney
  • 456brain
  • 456connective tissue
  • 388musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 164liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 101adipose tissue
  • 89bone element
  • 82artery
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 380AMP
  • 8ENCODE
Genome assembly (visualization)
  • 358hg19
  • 98GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

388 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
eQTL
gene expression
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
differential activity
tissue
muscle of arm33161611
muscle of leg2715132
muscle of back281313
psoas muscle7471
gastrocnemius medialis8441
primary cell
skeletal muscle satellite cell2216121
skeletal muscle fiber522
skeletal muscle cell21111
type I muscle cell3111
type II muscle cell3111
cell line
LHCN-M2211111
SJCRH302111
A673211
in vitro differentiated cells
myotube1
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