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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • 80target gene predictions
  • 74chromatin state
  • 31accessible chromatin
  • 11eQTL
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6Fine-mapped variants
  • 6caQTL
  • 6gene expression
Date released
  • 204September, 2022
  • 92February, 2021
  • 12July, 2025
  • 11November, 2021
  • 9February, 2024
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 284bed bed3+
  • 71bed bed9
  • 21tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 381Homo sapiens
Collection Tags
  • 204EpiMap
  • 79ENCODE
  • 27DGA
  • 25 T2DKP
  • 19ChIP-Atlas
  • 18T2DKP
  • 13AMP
  • 12GTEx
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 305tissue
  • 57primary cell
  • 17cell line
  • 2in vitro differentiated cells
Organ
  • 2905vasculature
  • 2853bodily fluid
  • 2842blood
  • 2840blood vessel
  • 2658vein
  • 960epithelium
  • 652kidney
  • 468connective tissue
  • 467brain
  • 381musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 259heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 157liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 89bone element
  • 87adipose tissue
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 78prostate gland
  • 75artery
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 370AMP
  • 11ENCODE
Genome assembly (visualization)
  • 362hg19
  • 100GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
  • deeptools
BIOSAMPLE
TYPE

381 results

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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
gene expression
tissue
muscle of arm33161611
muscle of leg2714152
muscle of back281313
psoas muscle7841
gastrocnemius medialis8541
primary cell
skeletal muscle satellite cell2226111
skeletal muscle fiber52
skeletal muscle cell21111
type I muscle cell1311
type II muscle cell1311
cell line
LHCN-M2211111
A673221
SJCRH302111
in vitro differentiated cells
myotube11
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