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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 81target gene predictions
  • 74chromatin state
  • 69candidate regulatory elements
  • 31accessible chromatin
  • 13eQTL
  • 13gene expression
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6caQTL
  • 4differential activity
Date released
  • 204September, 2022
  • 15February, 2024
  • 14February, 2021
  • 12July, 2025
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 5October, 2025
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 206bed bed3+
  • 71bed bed9
  • 27tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 319Homo sapiens
Collection Tags
  • 204EpiMap
  • 32DGA
  • 30 T2DKP
  • 19ChIP-Atlas
  • 18T2DKP
  • 13AMP
  • 12GTEx
  • 11STARNET
  • 4T2D
  • 1ENCODE
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 244tissue
  • 60primary cell
  • 14cell line
  • 1in vitro differentiated cells
Organ
  • 2892vasculature
  • 2837bodily fluid
  • 2833blood vessel
  • 2828blood
  • 2654vein
  • 909epithelium
  • 568kidney
  • 447connective tissue
  • 416brain
  • 319musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 159liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 93adipose tissue
  • 91stomach
  • 80artery
  • 78bone element
  • 78uterus
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 308AMP
  • 11ENCODE
Genome assembly (visualization)
  • 289hg19
  • 101GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

319 results

search-icontable-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
eQTL
gene expression
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
differential activity
tissue
muscle of arm16161611
muscle of leg1415132
muscle of back131313
psoas muscle8441
gastrocnemius medialis5441
primary cell
skeletal muscle satellite cell2216121
skeletal muscle fiber522
type I muscle cell13111
type II muscle cell13111
skeletal muscle cell11111
cell line
LHCN-M2111111
A673211
SJCRH301111
in vitro differentiated cells
myotube1
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