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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 79candidate regulatory elements
  • 74chromatin state
  • 31accessible chromatin
  • 13eQTL
  • 13target gene predictions
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6caQTL
  • 4differential activity
  • 2gene expression
Date released
  • 92February, 2021
  • 68September, 2022
  • 12July, 2025
  • 11November, 2021
  • 10February, 2024
  • 9March, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 5October, 2025
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2February, 2020
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 148bed bed3+
  • 71bed bed9
  • 22tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 250Homo sapiens
Collection Tags
  • 79ENCODE
  • 68EpiMap
  • 26DGA
  • 23 T2DKP
  • 19ChIP-Atlas
  • 18T2DKP
  • 12AMP
  • 11STARNET
  • 8GTEx
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 185tissue
  • 52primary cell
  • 11cell line
  • 2in vitro differentiated cells
Organ
  • 2835vasculature
  • 2807bodily fluid
  • 2801blood
  • 2791blood vessel
  • 2653vein
  • 594epithelium
  • 352connective tissue
  • 328brain
  • 300kidney
  • 250musculature of body
  • 176intestine
  • 171pancreas
  • 170lung
  • 164heart
  • 151embryo
  • 147limb
  • 134skin of body
  • 121liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 75adipose tissue
  • 73uterus
  • 71stomach
  • 64artery
  • 59mammary gland
  • 57bone element
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 26spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 239AMP
  • 11ENCODE
Genome assembly (visualization)
  • 226hg19
  • 101GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
  • r
BIOSAMPLE
TYPE

250 results

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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
target gene predictions
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
differential activity
gene expression
tissue
muscle of arm171611
muscle of leg141521
muscle of back1513
psoas muscle3414
skeletal muscle1121142
primary cell
skeletal muscle satellite cell126111
skeletal muscle fiber52
type I muscle cell3111
type II muscle cell3111
skeletal muscle cell1111
cell line
LHCN-M211111
A673111
SJCRH30111
in vitro differentiated cells
myotube11
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