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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 78candidate regulatory elements
  • 74chromatin state
  • 31accessible chromatin
  • 12target gene predictions
  • 11eQTL
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6Fine-mapped variants
  • 6caQTL
Date released
  • 92February, 2021
  • 68September, 2022
  • 12July, 2025
  • 11November, 2021
  • 9February, 2024
  • 9March, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2February, 2020
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 148bed bed3+
  • 71bed bed9
  • 16bigWig
  • 16tsv
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 239Homo sapiens
Collection Tags
  • 79ENCODE
  • 68EpiMap
  • 26DGA
  • 23 T2DKP
  • 19ChIP-Atlas
  • 18T2DKP
  • 12AMP
  • 8GTEx
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 174tissue
  • 52primary cell
  • 11cell line
  • 2in vitro differentiated cells
Organ
  • 3318blood
  • 2819vasculature
  • 2801bodily fluid
  • 2799blood vessel
  • 2654vein
  • 764brain
  • 585epithelium
  • 404kidney
  • 395heart
  • 383connective tissue
  • 299lung
  • 245intestine
  • 239musculature of body
  • 226skin of body
  • 213pancreas
  • 193liver
  • 158large intestine
  • 151embryo
  • 147limb
  • 142eye
  • 113adipose tissue
  • 111muscle organ
  • 108extraembryonic component
  • 92stomach
  • 83uterus
  • 76mammary gland
  • 73adrenal gland
  • 72bone element
  • 71thymus
  • 68artery
  • 65placenta
  • 60__MARKER__
  • 60prostate gland
  • 59small intestine
  • 50spleen
  • 47ureter
  • 46gonad
  • 46lymph node
  • 44penis
  • 38thyroid gland
  • 32esophagus
  • 32spinal cord
  • 23ovary
  • 22testis
  • 17nerve
  • 16skeleton
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 12bronchus
  • 12mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 228AMP
  • 11ENCODE
Genome assembly (visualization)
  • 226hg19
  • 100GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
software_used.software.name!
  • r
BIOSAMPLE
TYPE

239 results

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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
target gene predictions
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
tissue
muscle of arm171611
muscle of leg141521
muscle of back1513
psoas muscle3414
gastrocnemius medialis4411
primary cell
skeletal muscle satellite cell126111
skeletal muscle fiber52
type I muscle cell3111
type II muscle cell3111
skeletal muscle cell1111
cell line
LHCN-M211111
A673111
SJCRH30111
in vitro differentiated cells
myotube11
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