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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
19
ChIP-seq
5
total RNA-seq
1
ATAC-seq
Assay category
21
DNA accessibility
19
DNA binding
5
Transcription
Target of assay
24
histone
24
histone modification
broad histone mark
11
control
8
narrow histone mark
Date released
26
October, 2019
18
June, 2019
1
February, 2020
Available data
44
bam
33
bigWig
29
bed narrowPeak
28
bigBed narrowPeak
20
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
5
tsv
Organism
45
Homo sapiens
Biosample type
45
tissue
Organ
868
pancreas
749
liver
640
connective tissue
480
epithelium
471
adipose tissue
339
kidney
heart
216
brain
191
vasculature
185
blood vessel
159
bone element
127
artery
88
limb
76
musculature of body
69
blood
69
bodily fluid
61
eye
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
45
AMP-T2D consortium
organ_slims!
heart
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
45 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
2
19
5
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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