Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 6candidate regulatory elements
  • 4chromatin state
  • 3Fine-mapped variants
  • 3accessible chromatin
  • 3target gene predictions
  • 2eQTL
  • 2gene expression
  • 2variant allelic effects
Date released
  • 9September, 2022
  • 3February, 2020
  • 3February, 2021
  • 3March, 2020
  • 3May, 2020
  • 1January, 2020
  • 1January, 2022
  • 1June, 2020
  • 1November, 2019
Available data
  • 15bed bed3+
  • 6tsv
  • 4bed bed9
  • 2bigWig
  • 1bigBed bed9
Organism
  • 25Homo sapiens
Collection Tags
  • 9EpiMap
  • 5GTEx
  • 4ENCODE
  • 2DGA
  • 1ChIP-Atlas
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 25tissue
Organ
  • 2913vasculature
  • 2859bodily fluid
  • 2848blood
  • 2848blood vessel
  • 2658vein
  • 958epithelium
  • 652kidney
  • 480connective tissue
  • 467brain
  • 380musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 162liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 99adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 79artery
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 25AMP
Genome assembly (visualization)
  • 22hg19
  • 11GRCh38
software_used.software.name!
  • snap
BIOSAMPLE
TYPE

25 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
Fine-mapped variants
accessible chromatin
target gene predictions
eQTL
gene expression
variant allelic effects
tissue
tibial nerve64333222
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego