Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1accessible chromatin
  • 1candidate regulatory elements
  • 1chromatin state
  • 1target gene predictions
Date released
  • 3September, 2022
  • 1June, 2020
Available data
  • 3bed bed3+
  • 1bed bed9
Organism
  • 4Homo sapiens
Collection Tags
  • 3EpiMap
  • 1ChIP-Atlas
Biosample type
  • 4in vitro differentiated cells
Organ
  • 2904vasculature
  • 2853bodily fluid
  • 2842blood
  • 2839blood vessel
  • 2658vein
  • 957epithelium
  • 651kidney
  • 463connective tissue
  • 450brain
  • 373musculature of body
  • 310lung
  • 286intestine
  • 267pancreas
  • 254heart
  • 242limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 159liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 90adipose tissue
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82uterus
  • 77prostate gland
  • 73artery
  • 72adrenal gland
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 42spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24nerve
  • 24testis
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 4AMP
Genome assembly (visualization)
  • 4hg19
  • 1GRCh38
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

4 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
in vitro differentiated cells
olfactory neurosphere cell line1111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego