Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
candidate regulatory elements
51
target gene predictions
42
chromatin state
24
accessible chromatin
20
gene expression
18
eQTL
14
binding sites
11
histone modifications
6
differential activity
5
Fine-mapped variants
4
variant allelic effects
2
sQTL
2
variant to gene
Date released
115
September, 2022
66
February, 2021
13
March, 2023
12
May, 2021
10
June, 2020
9
March, 2020
8
August, 2021
7
January, 2022
5
May, 2020
4
February, 2024
4
January, 2020
4
October, 2022
3
August, 2017
3
March, 2024
3
November, 2021
2
February, 2020
2
January, 2021
1
April, 2019
1
August, 2018
1
January, 2018
1
June, 2021
1
November, 2019
1
October, 2019
Available data
187
bed bed3+
38
bed bed9
29
tsv
13
bigWig
2
bigBed bed9
1
bigBed narrowPeak
Organism
276
Homo sapiens
Biosample type
142
tissue
75
cell line
55
primary cell
4
in vitro differentiated cells
Organ
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
271
AMP
3
ENCODE
2
T1D
Genome assembly (visualization)
237
hg19
61
GRCh38
organ_slims!
epithelium
BIOSAMPLE
TYPE
276 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
histone modifications
differential activity
Fine-mapped variants
variant allelic effects
sQTL
variant to gene
tissue
islet of Langerhans
1
3
6
11
13
2
1
2
1
2
2
body of pancreas
8
5
4
2
1
3
1
pancreas
5
5
3
5
1
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 10 more…
cell line
GM23248
2
1
1
1
1
1
Panc1
2
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 16 more…
primary cell
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
skin fibroblast
2
3
2
2
pancreatic stellate cell
1
2
2
3
pancreatic quiescent stellate cell
3
+ See 6 more…
in vitro differentiated cells
iPS DF 4.7 Cell Line
1
1
1
skin fibroblast
1
See all biosamples
Download