Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
accessible chromatin
80
candidate regulatory elements
77
gene expression
76
target gene predictions
50
chromatin state
49
differential activity
22
binding sites
22
variant allelic effects
18
eQTL
11
Fine-mapped variants
9
histone modifications
2
sQTL
2
variant to gene
1
caQTL
Date released
122
September, 2022
74
February, 2021
51
March, 2023
42
February, 2024
35
May, 2021
30
September, 2023
24
November, 2021
20
January, 2021
18
March, 2020
17
January, 2020
16
May, 2020
9
August, 2021
9
June, 2020
8
October, 2019
7
August, 2018
5
January, 2022
4
August, 2017
4
February, 2020
4
October, 2022
3
April, 2020
3
November, 2019
2
February, 2023
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
Available data
305
bed bed3+
129
tsv
79
bigWig
45
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
txt
Organism
511
Homo sapiens
Biosample type
270
primary cell
192
tissue
44
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
432
AMP
30
KPMP
24
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
371
hg19
133
GRCh38
organ_slims!
artery
nose
BIOSAMPLE
TYPE
511 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
Fine-mapped variants
histone modifications
sQTL
variant to gene
caQTL
primary cell
endothelial cell of umbilical vein
2
6
4
5
2
1
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 39 more…
tissue
islet of Langerhans
6
11
1
3
2
1
13
2
1
2
2
spinal cord
1
14
8
7
1
body of pancreas
8
2
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
ascending aorta
1
4
1
2
3
1
1
3
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download