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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 78ChIP-seq
Assay category
  • 78DNA binding
Target of assay
  • 151histone
  • 151histone modification
  • 78broad histone mark
  • 73narrow histone mark
  • 53control
  • 19transcription factor
  • 9RNA binding protein
  • 5nucleotide modification
Date released
  • 32August, 2017
  • 19October, 2018
  • 17September, 2018
  • 6November, 2019
  • 4October, 2019
Available data
  • 73bigWig
  • 70bam
  • 68bed narrowPeak
  • 52fastq
  • 30bigBed narrowPeak
  • 8bed broadPeak
  • 8tagAlign
  • 6bed bed3+
Organism
  • 74Homo sapiens
Biosample type
  • 41tissue
  • 27primary cell
  • 10cell line
Organ
  • 78pancreas
  • 70brain
  • 57heart
  • 45blood vessel
  • 45vasculature
  • 44connective tissue
  • 44epithelium
  • 42liver
  • 34limb
  • 20adipose tissue
  • 20musculature of body
  • 16nerve
  • 15kidney
  • 14artery
  • 9vein
  • 4embryo
  • 4spleen
Project
  • 78AMP
Genome assembly (visualization)
  • 73hg19
  • 69GRCh38
Lab
  • 78AMP-T2D consortium
Audit category:
  • 6inconsistent ontology term
Audit category:
  • 22missing controlled_by
Audit category:
  • 3inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

78 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans14
body of pancreas11
endocrine pancreas8
pancreas8
primary cell
pancreatic endocrine cell11
pancreatic ductal cell6
pancreatic acinar cell4
pancreatic alpha cell3
pancreatic beta cell3
cell line
EndoC_BH16
Panc14
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